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    • 描述:
    • Bgee allows to automatically compare gene expression patterns between species, by referencing expres 
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    • 域名年龄:12年3个月28天  注册日期:2013年04月13日  到期时间:
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    抓取时间:2019年09月07日 12:44:12
    网址:http://bgee.org/
    标题:Welcome to Bgee: a dataBase for Gene Expression Evolution
    关键字:bgee, gene expression, evolution, ontology, anatomy, development, evo-devo database, anatomical ontology, developmental
    描述:Bgee allows to automatically compare gene expression patterns between species, by referencing expression data on anatomical ontologies, and designing homology relationships between them.
    主体:
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    Toggle navigationAnalysis TopAnat: Expression enrichment analysisExpression comparisonSearch Gene searchSPARQL endpointAnatomical homologyDownload Gene expression callsProcessed expression valuesMySQL dumpsResources R packagesAnnotationsOntologiesSource codeSupport GTEx in BgeeTopAnat: Expression enrichment analysisGene expression callsFAQAbout About BgeeBgee collaborationsBgee sourcesBgee blogBgee privacy notice
    version 14.0
    Gene expression data in animals
    Expression comparison
    Expression enrichment analysis
    Gene search
    Gene expression data
    Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data) and from multiple data sets (including GTEx data).
    Simply normal
    Bgee is based exclusively on curated "normal", healthy, expression data (e.g., no gene knock-out, no treatment, no disease), to provide a comparable reference of normal gene expression.
    Comparable between species
    Bgee produces calls of presence/absence of expression, and of differential over-/under-expression, integrated along with information of gene orthology, and of homology between organs. This allows comparisons of expression patterns between species.
    Species with data in Bgee(click on species to see more details)H. sapienshumanM. musculusmouseD. reriozebrafishD. melanogasterfruit flyC. elegansnematodeP. troglodyteschimpanzeeP. paniscusbonoboG. gorillagorillaM. mulattamacaqueR. norvegicusratB. tauruscattleS. scrofapigE. caballushorseO. cuniculusrabbitC. lupus familiarisdogF. catuscatC. porcellusguinea pigE. europaeushedgehogM. domesticaopossumO. anatinusplatypusG. galluschickenA. carolinensisgreen anoleX. tropicaliswestern clawed frogD. ananassaeDrosophila ananassaeD. mojavensisDrosophila mojavensisD. pseudoobscuraDrosophila pseudoobscuraD. simulansDrosophila simulansD. virilisDrosophila virilisD. yakubaDrosophila yakubaSee RNA-Seq and Affymetrix dataSee gene expression calls
    News    (features are being added incrementally)
    2019-05-21
    New expression comparison page.    New anatomical homology page.    New resource pages: R packages, Annotations, Ontologies and Source code pages.    New MySQL dumps and SPARQL endpoint pages.    New Bgee collaborations page.    Update of the menu
    2019-05-12
    Update of the gene search page:            Addition of a gene search result page (i.e. search with "HBB")        Improvement of the speed of autocompletion        Modification of gene pages to display gene name synoyms,    and cross-references to other resources
    2019-04-05
    New privacy policy page  New FAQ page                 where we address common user queries  New documentation page             specific to GTEx project to learn how we integrated these data             into Bgee  Update to Bgee 14.0 of the gene expression call documentation               Update of the data source page             to provide version infor

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